Analysis and Visualization of Genotype Networks
Usability Tips and Updates
Note: The complete list of updates can be found in the
Bug fix (17.12.2016):
The 'consider reverse complements' option did not properly take into account all possible checks required for Evolvability, Accessibility, Neighbor abundance, Diversity index, and Overlap analyses. See details
. This issue has been resolved.
Hovering the mouse cursor over an input element or the corresponding text label enables the tooltip
You can analyze your data on your own computer using a command line utility, or API access. Check out the
Genonets Python package
For alphabet type 'DNA', it is now possible to specifiy whether or not reverse complements should be considered
The 'Overlap' analysis now provides two additional genotype set level parameters
You can either perform analyses, or upload a visualization input file for visualization only
Parameters required to run the analyses.
Note: All parameters are mandatory unless explicitly marked as 'optional'
Genonets Input File
Sample input file
Use sample file
(Lower bound on quantitative phenotype)
Perform all analyses
Select one or more analyses
Note: Analysis type 'Evolvability' is always included, and is therefore not listed here
Would you like to be notified via email when the results are ready?
Your email address
Visualization Input File
Please cite the following article when you use the Genonets Server or the Genonets package in your work.
Fahad Khalid, José Aguilar-Rodríguez, Andreas Wagner, and Joshua L. Payne.
Genonets server—a web server for the construction, analysis and visualization of genotype networks.
Nucl. Acids Res. (08 July 2016) 44 (W1): W70-W76 first published online April 22, 2016 doi:10.1093/nar/gkw313.